Iam loking for software about naming organic molecules?
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you can use Chem office but not as partical naming and also you can use merck index software and if you couldnt find it on your market I have it the name of organic molecules depinding  on many think even the software didnt help you as you think
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1 st isomer of a compound = n-(name of compound)\n2 nd isomer = iso-(")\n3 rd isomer = neo-(")\nFor example \nBUTANE C5H12\nIsomers of BUTANE\nn-BUTANE\nCH3-CH2-CH2-CH2-CH3\n\nISO-BUTANE\n   CH3\n     |\nCH3-CH-CH2-CH3\n\nNEO-BUTANE\n   CH3\n     |\nCH3-C-CH3\n     |\n   CH3
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methyl3-benzoyloxy-8-methyl-8-azabicyclo [3.2.1]octane-4-carboxylate  (thats the systematic name)\n\nFormula: C17H21NO4
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Just count the (sigma) bonds and the lone electron pairs and memorize the cooresponding geometric shapes.  Sorry, but it's the only way.
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ChemDraw from CambridgeSoft Corporation may be help you. Look at www.cambridgesoft.com
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not sure of all that you are asking, but the following site is selling software which does what you are asking about and has some descriptions... Hope this helps!
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Search for any chemistry website
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um...right...please retype the question. if you want to know more about the branches (inorganic, organic, physical etc) try www.chemistry.org
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If they are linear, then it's quite easy. \n\n1. Number the carbon atoms, trying to assign the lower number possible to double and triple bonds.\n2. Check for double or triple bonds an their numbers.\n3. Write a preffix that expresses the number of carbon atoms:\n\nif its 1 , "meth"\nif its 2 , "eth"\nif its 3 , "prop"\nif its 4 , "but"\nif its 5 , "pent"\nif its 6 , "hex" and now you can carry on.\n\n4. Write the number of the double or triple bonds present.\n5. Write a suffix for the type of compund (no double bonds: "ane", double bonds, "ene", triple bonds "yne")\n\nExamples are:\n\nCH3-CH2-CH=CH2     ____   1-butene (or butene)\n\nCH3-CH2-C≡C-CH3     ____    2- butyne\n\nCH3-CH2-CH2-CH=C=CH-C≡CH   ____    octa-3,4-diene-1-yne\n\nIt can be weird for some cases. So practice.
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Here is one for a software package which can be down loaded for a 30 day test:\n\nhttp://www.chembuddy.com/?left=EBAS&right=balancing-chemical-equations\n\nand another at:\n\nhttp://chemfinder.cambridgesoft.com/
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Try chemdex.\n\nhttp://www.chemdex.org/
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www.chemfinder.com might help
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STN, owned by Chemical Abstracts Society, has dozens of databases for this purpose.\nhttp://www.cas.org/stn.html\nAlso, look at the Diaglog service, by Questel.Orbit.
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Try http://www.phazeddl.com/ \nThis site provides free downloads.
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http://www.chemtutor.com/\nthis was a site that helps all in the basics That is how i learned it.
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Go to this site and it will show you structures of a whole bunch of molecules with Carbon and without, by formula and by name, kind of mess around with it for a while. http://www.chem.purdue.edu/gchelp/molecules/index.html
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http://www.edu.pe.ca/montaguehigh/grass/chem/notes/ptable.html\nhit print screen.