Update app.py
Browse files
app.py
CHANGED
|
@@ -37,13 +37,18 @@ def CTXGen(X1, X2, τ, g_num, length_range):
|
|
| 37 |
is_stopped = False
|
| 38 |
start, end = length_range
|
| 39 |
|
| 40 |
-
|
| 41 |
-
|
| 42 |
-
|
| 43 |
-
|
| 44 |
-
|
| 45 |
-
|
| 46 |
-
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| 47 |
|
| 48 |
model.eval()
|
| 49 |
with torch.no_grad():
|
|
|
|
| 37 |
is_stopped = False
|
| 38 |
start, end = length_range
|
| 39 |
|
| 40 |
+
if X1!='X' and X2!='X':
|
| 41 |
+
msa_data = pd.read_csv('conoData_C0.csv')
|
| 42 |
+
msa = msa_data['Sequences'].tolist()
|
| 43 |
+
msa = [x for x in msa if x.startswith(f"{X1}|{X2}")]
|
| 44 |
+
msa = random.choice(msa)
|
| 45 |
+
X4 = msa.split("|")[3]
|
| 46 |
+
X5 = msa.split("|")[4]
|
| 47 |
+
X6 = msa.split("|")[5]
|
| 48 |
+
else:
|
| 49 |
+
X4 = ''
|
| 50 |
+
X5 = ''
|
| 51 |
+
X6 = ''
|
| 52 |
|
| 53 |
model.eval()
|
| 54 |
with torch.no_grad():
|