vision-token-masking-phi / scripts /run_synthea_docker.sh
Ric
Initial commit: Justitia - Selective Vision Token Masking for PHI-Compliant OCR
a6b8ecc
#!/bin/bash
# Run Synthea using Docker (alternative to local Java installation)
PATIENTS=${1:-100}
STATE=${2:-Massachusetts}
OUTPUT_DIR=${3:-./data/synthetic/synthea}
echo "Running Synthea in Docker..."
echo "Patients: $PATIENTS"
echo "State: $STATE"
echo "Output: $OUTPUT_DIR"
# Create output directory
mkdir -p "$OUTPUT_DIR"
# Run Synthea in Docker container
docker run --rm \
-v "$(pwd)/$OUTPUT_DIR:/output" \
synthetichealth/synthea:latest \
-p $PATIENTS \
-s $STATE \
--exporter.baseDirectory=/output
echo "✓ Generation complete!"
echo "Files saved to: $OUTPUT_DIR"